Binding Chemistry

Binding Chemistry

Binding Chemistry

Chemical interactions tools and models helping you simulate and understand your molecule's binding behavior.

Chemical interactions tools and models helping you simulate and understand your molecule's binding behavior.

An image of Dreelio's dashboard

Achieve unified intelligence

Equipped with Models for Every Challenge

Equipped with Models for Every Challenge

An image of Freelio's project ui
An image of Freelio's project ui

Static Biochemical Interactions

Virtual Screening

Screen your molecular libraries using high-throughput static, flexible, and ensemble docking with seamless binding affinity and conformational analysis.

An image of Freelio's project ui
An image of Freelio's project ui

Static Biochemical Interactions

Boltz Co-Folding

Test binding affinity metrics between your molecule and associated target proteins for precise biomolecular interaction predictions.

An image of Freelio's project ui
An image of Freelio's project ui

Static Biochemical Interactions

BoltzGen Co-Folding

Generate binding models between your designed molecules, peptides, or proteins, and target protein structures across multiple interaction pairings.

An image of Freelio's project ui
An image of Freelio's project ui

Compound Analytics

QSAR Modeling

Upload molecules and their associated data to view cluster-level statistics and perform substructure/motif analysis.

An image of Freelio's project ui
An image of Freelio's project ui

Compound Analytics

Pharmacophore Analysis

Analyze protein-ligand interactions for multiple complexes with atomistic 2D interaction maps and 3D visualization.

An image of Freelio's project ui
An image of Freelio's project ui

Generative Chemistry

Generative Chemistry

Generate novel chemistries using a variety of reinforcement learning models, expand your lead series, and run multi-parameter optimization on your compounds.

An image of Freelio's project ui
An image of Freelio's project ui

Dynamic Molecular Interactions

Protein Water MD

Simulate desired proteins in water across various conditions such as ion and solvent parameters, energies, temperatures, and time scales.

An image of Freelio's project ui
An image of Freelio's project ui

Dynamic Molecular Interactions

Protein Ligand

Simulate protein–ligand binding with high fidelity dynamics in realistic solvent and ionic environments over extended timescales.

An image of Freelio's project ui
An image of Freelio's project ui

Dynamic Molecular Interactions

Ligand Membrane

Simulate compound permeability across 100+ membrane types under realistic dynamic pulling conditions.

An image of Freelio's project ui
An image of Freelio's project ui

Free Energy Perturbation

ABFE/RBFE Engine

Calculate absolute or relative binding free energy for your ligand-protein pairs with select protein anchors, force fields, and simulation parameters.

An image of Freelio's project ui
An image of Freelio's project ui

Free Energy Perturbation

Absolute Binding FE

Compute absolute binding free energies using alchemical FEP with full molecular mechanics, force‑field precision, and integrated ligand–protein systems.

An image of Freelio's project ui

Static Biochemical Interactions

Virtual Screening

Screen your molecular libraries using high-throughput static, flexible, and ensemble docking with seamless binding affinity and conformational analysis.

Static Biochemical Interactions

Boltz Co-Folding

Test binding affinity metrics between your molecule and associated target proteins for precise biomolecular interaction predictions.

An image of Freelio's project ui
An image of Freelio's project ui

Static Biochemical Interactions

BoltzGen Co-Folding

Generate binding models between your designed molecules, peptides, or proteins, and target protein structures across multiple interaction pairings.

Compound Analytics

QSAR Modeling

Upload molecules and their associated data to view cluster-level statistics and perform substructure/motif analysis.

An image of Freelio's project ui
An image of Freelio's project ui

Compound Analytics

Pharmacophore Analysis

Analyze protein-ligand interactions for multiple complexes with atomistic 2D interaction maps and 3D visualization.

Generative Chemistry

Generative Chemistry

Generate novel chemistries using a variety of reinforcement learning models, expand your lead series, and run multi-parameter optimization on your compounds.

An image of Freelio's project ui
An image of Freelio's project ui

Dynamic Molecular Interactions

Protein Water MD

Simulate desired proteins in water across various conditions such as ion and solvent parameters, energies, temperatures, and time scales.

Dynamic Molecular Interactions

Protein Ligand

Simulate protein–ligand binding with high fidelity dynamics in realistic solvent and ionic environments over extended timescales.

An image of Freelio's project ui
An image of Freelio's project ui

Dynamic Molecular Interactions

Ligand Membrane

Simulate compound permeability across 100+ membrane types under realistic dynamic pulling conditions.

Free Energy Perturbation

ABFE/RBFE Engine

Calculate absolute or relative binding free energy for your ligand-protein pairs with select protein anchors, force fields, and simulation parameters.

An image of Freelio's project ui
An image of Freelio's project ui

Free Energy Perturbation

Absolute Binding FE

Compute absolute binding free energies using alchemical FEP with full molecular mechanics, force‑field precision, and integrated ligand–protein systems.

The Final Operating System of Pharma.

909.267.0577

3680 Wilshire Blvd
P04-1343 Los Angeles
CA 90010

The Final Operating System of Pharma.

909.267.0577

3680 Wilshire Blvd
P04-1343 Los Angeles
CA 90010